SRMA: SRMA Analysis of Array-based Sequencing Data

SRMA is an R package for sequence base calling using Affymetrix custom resequencing arrays. It includes R implementations of the Sequencing Robust Multi-array Analysis methods that were developed to accurately identify all single nucleotide variants in candidate gene sequences.

Version: 1.0.0-2
Depends: R (≥ 2.12.0), R.utils, R.filesets, nlme, aroma.core, aroma.affymetrix, splines, MASS, methods, mclust, mnormt, ellipse
Published: 2012-04-13
Author: Wenyi Wang, Nianxiang Zhang, Yan Xu
Maintainer: Wenyi Wang <wenyiw at mdanderson.org>
License: GPL (≥ 2)
NeedsCompilation: no
CRAN checks: SRMA results

Downloads:

Package source: SRMA_1.0.0-2.tar.gz
MacOS X binary: SRMA_1.0.0-2.tgz
Windows binary: SRMA_1.0.0-2.zip
Reference manual: SRMA.pdf
Old sources: SRMA archive